MEET THE LAB

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Dr. Seth Newsome

Professor of Biology and Associate Director UNM Center for Stable Isotopes
My research has three themes: First, I quantify niche breadth at multiple levels of biological organization –– individuals to communities –– to better understand the energetic basis of community assembly and structure. Second, I use controlled feeding experiments in which I vary the chemical composition and concentrations of dietary macromolecules to understand how animals process protein, lipids, and carbohydrates. This enables me to trace energy flow within organisms at the molecular level, which provides insights into which exogenous and endogenous resources are used to maintain homeostasis. Third, I often adopt a deep temporal perspective that compares species interactions in modern and ancient ecosystems to provide unique data on the full range of animal behavioral and ecological flexibility. Such information is important for designing effective long-term management and conservation strategies. Besides science, I enjoy mountain biking, rafting, surfing, fly fishing, and have a soft spot in my heart for old school hip-hop.

[email protected]

Lab Members

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Dr. Geraldine Busquets Vass

Postdoc
I am interested in understanding the foraging ecology and reproductive physiology of marine megafauna via analysis of intrinsic biomarkers in animal tissues. During my Ph.D. at CICIMAR-IPN (La Paz, Mexico), I studied the foraging ecology, movement patterns, and physiology of blue whales using stable isotope analysis in metabolically active (skin) and inert (baleen) tissues. My postdoctoral research is sponsored by CONACYT and will characterize the foraging ecophysiology and migratory patterns of blue, gray, fin, and humpback whales in the eastern Pacific Ocean using bulk tissue and amino acid isotope analysis of baleen plates. This study will enable us to assess the vulnerability of baleen whales to environmental change that we anticipate will inform species-specific management plans.

[email protected]
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Dr. Emma Elliott Smith

Postdoc
I am an ecologist that investigates the role of people and environmental change in shaping ecological processes. I am particularly interested in exploring how past records of biological change can provide novel insights into modern environmental challenges. My work involves interdisciplinary collaborations with paleoecologists, archaeologists, and biologists. I integrate these fields through carbon, nitrogen, and hydrogen stable isotope analysis of bulk tissues and individual amino acids, which provide a common chemical currency for comparing specimens from different temporal and geographical contexts. My recent studies have focused on (1) evaluating marine food web architecture and stability through the Holocene, and (2) characterizing the role of people in shaping ecological processes across space and through time.

[email protected]
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Jennifer Lindsey

M.Sc. Student
I am interested in microbial ecology in extreme environments that are often the first to be affected by environmental change. My research focuses on polar lakes in the McMurdo Dry Valleys of Antarctica, where I use genomic data to identify microbial community composition and function in combination with stable isotope analysis to understand how abiotic and biotic factors affect the ecological role(s) these organisms play within these unique ecosystems. My academic background is in animal science and my previous work for a conservation based ranching company is what drove me to explore ecology to learn more about the unseen dynamics of our world. I am passionate about accessibility in scientific research and would like to improve science communication between higher education and the general public.

[email protected]
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Rachel Seddon

Ph.D. Student
I am interested in the trophic dynamics of aquatic food webs, specifically how microplankton influence the movement of energy through aquatic ecosystems and their influence on biogeochemical cycling. Along with the Newsome Lab, I am also affiliated with the McMurdo Long-Term Ecological Research Site in the McMurdo Dry Valleys of Victoria Land, Antarctica. My research combines next-generation genetic sequencing and amino acid isotope analysis to study the ecological role of globally ubiquitous mixotrophic protists within the paleo-lakes of the McMurdo Dry Valleys. I aim to provide new insights into the impact that aquatic mixotrophic microbes have on trophic dynamics and the biological carbon pump with the hope of enabling more accurate predictions of how marine ecosystems will respond to climate change.

[email protected]
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Natalia Chavez

Ph.D. Student
My research interests are centered on understanding the intricate relationships between microbial metabolism and food web dynamics, particularly in extreme environments. I plan to explore lipid metabolism using carbon and hydrogen isotopes to unravel how organisms allocate, assimilate, and modify resources within bacterial membranes. By integrating food web ecology, I plan to examine nutritional requirements and trophic interactions across diverse species, focusing on how metabolic processes scale up to influence entire ecosystems. My work will combine advanced analytical techniques such as GC-IRMS, metagenomics, and lipidomics to investigate the role of microbes in biogeochemical cycles and how these processes impact the broader ecological networks they inhabit.

[email protected]
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Cloe Knutson

M.Sc. Student
I am developing an equilibration method for analyzing the triple oxygen isotope composition of water from whole blood and plant tissues on a tunable infrared laser directed absorption spectroscopy (TILDAS). This method is less labor intensive than traditional methods for measuring triple oxygen isotopes at high precision, requiring small sample size and little preparation. My goal is use this approach to better understand the water budgets of granivorous small mammals in desert ecosystems. Specifically, my project quantifies how the water budget of kangaroo rats shift between free (seed) water and metabolic water on monthly timescales in response to environmental water availability. I am also examining how the triple oxygen isotope composition of plant water changes diurnally among different functional groups (C3 versus C4) and tissue types.

[email protected]
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Conner Mertz

Ph.D. Candidate
I am fascinated by the complexity and elegance of how cells maintain homeostasis, respond to stress and defend themselves against infectious agents. I am particularly interested in the interactions between microbes and their hosts. Since all animals host microbes in their gut, I plan to look at the gut microbiome’s impact on host physiology and protein metabolism. My graduate research integrates two fields, next-generation genetic analysis and amino acid isotope analysis, to describe the community composition of the gut microbiome while also exploring the role microbes play in the synthesis of amino acids used by the host. Host-microbe interactions range from mutualistic to pathogenic, therefore understanding these interactions are integral to our understanding of health and disease.

[email protected]
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Caitlin Zimmer

M.Sc. Student
I am interested in researching the factors that influence food web dynamics and community connectivity within marine environments. Understanding these ecological interactions is an essential first step to understanding what makes an ecosystem resilient and how this resiliency will be affected by natural and anthropogenic stressors. For my masters, I aim to use amino acid nitrogen isotope analysis to investigate how pelagic predator communities respond to shifts in ocean conditions and prey abundance, focusing specifically on food chain length and the linkages between epipelagic and mesopelagic food webs. Before beginning my graduate school journey, I was a marine ecology teacher at The Island School in the Bahamas. This has inspired me to want to communicate the diverse applications of stable isotope analysis to the wider public in everyday language.

[email protected]
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Joshua Cortez

Ph.D. Student
I am interested in consumer-resource interactions in stochastic environments, specifically how community assembly is impacted by the behavioral decisions of rodents in desert ecosystems. Using novel techniques that track hundreds of individual rodents simultaneously, my projects aim to tease out which ecological factors are most important to foraging decisions and the impact of those decisions on individual body condition and survival. Further, I am interested in ecosystem engineering and am combining rodent behavioral and net primary production data to study the top down impacts of small mammals on plant communities. Currently, these projects are being pursued in an ecotone between creosote shrubland and black grama grassland at the Sevilleta National Wildlife Refuge in central New Mexico.

[email protected]
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Anejelique Martinez

M.Sc. Student
I am interested in the function of the gut microbiome in wild mammals, specifically how it intersects with conservation, microbiology, and the impact of humans on the natural world. My graduate research aims at understanding the interactions between prokaryotic and eukaryotic microbes and their hosts in a community of small mammals inhabiting a stochastic and resource-limited desert ecosystem in the Chihuahuan Desert of central New Mexico. I am combining amino acid isotope analysis with 16s/18s rRNA gene sequencing and fecal metabarcoding to understand the functional role of the gut microbiome in host protein metabolism. The study of host-microbe will be integral to our understanding of species interactions and the importance of how an intrinsic source of (brown) microbial energy influences consumer resource selection.

[email protected]
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Austin Murrell

M.Sc. Student
My research interests involve a range of interdisciplinary topics including population and trophic ecology of marine megafauna combined with biogeochemical and socioeconomic factors. My master’s will examine the prehistoric ecology of various cetacean species via isotope analysis of bone collagen collected from archaeological sites in the Tierra del Fuego, Argentina. I seek to use this information along with amino acid isotope analysis to apply historical context to current population dynamics that face threats of environmental and anthropogenic stressors. I desire to implement these themes to the future recovery of baleen whales while also gaining a more extensive comprehension of their ecologies, especially in understudied areas of the world.

[email protected]
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Alana Robinson

CSI Technician
I am interested in the metabolic adaptations used by organisms to maintain homeostasis, especially under conditions of extreme stress and how this intersects with conservation, microbiology, and immunology. While pursuing my undergraduate degree in biochemistry, I used stable isotope analysis of individual amino acids to examine differences in sea otter protein metabolism between tissue types. I am currently collaborating with researchers at the UNM Cancer Center on a study using amino acid isotope and metatranscriptomic data to explore the metabolism of brain tumors (glioblastoma). As a CSI technician, I prepare and analyze samples, help with outreach activities, and assist with graduate student and postdoctoral research.

[email protected]

Dr. Philip J. Manlick (Postdoc): Research Wildlife Biologist, U.S. Forest Service (Juneau, AK)

Dr. Oliver Shipley (Postdoc): Assistant Professor, Stony Brook University (Stony Brook, NY)

Dr. John P. Whiteman (Postdoc): Assistant Professor, Old Dominion University (Norfolk, VA)

Dr. Christy J. Mancuso (Postdoc): Thermo Scientific (Albany, NY)

Dr. Nico Lubcker (Postdoc): Lajuma Research Centre (Makhado, Limpopo, South Africa)

Dr. Emma A. Elliott Smith (Ph.D.): Postdoctoral Scientist, University of New Mexico (Albuquerque, NM)

Dr. Alexi C. Besser (Ph.D.): Postdoctoral Scientist, Arizona State University (Tempe, AZ)

Deborah Boro (M.Sc.): Natural Heritage New Mexico (Albuquerque, NM)

Laura Pages Barcelo (M.Sc.): Bosque Ecosystem Monitoring Program (Albuquerque, NM)

Christina Blevins (M.Sc.): Sandia National Laboratory (Albuquerque, NM)

Jessica Johnson (M.Sc.): Los Alamos National Laboratory (Los Alamos, NM)

Dr. Rodrigo Bastos: Postdoctoral Fellow, Universidade Federal de Pernambuco (Recife, Brazil)

Juliano Coletto: Ph.D. Student, Universidade Federal do Rio Grande (Rio Grande, Brazil)

Andre Costa Pereira: Ph.D. Student, Universidade de Brasilia (Brasilia, Brazil)

Dr. Marilyn L. Fogel: Distinguished Professor and EDGE Director, UC Riverside (Riverside)

Michael Fox: Ph.D. Candidate, Scripps Institute of Oceanography (La Jolla)

Sean Hixon: Ph.D. Student, Pennsylvania State University (College Station)

Dr. Rocio Loizaga de Castro: Research Professor, Centro Nacional Patagonico (Puerto Madryn, Argentina)

Dr. Paul L. Koch: Distinguished Professor and Dean, UC Santa Cruz (Santa Cruz)

Sabina Llamazares: Ph.D. Student, Universidad de Buenos Aires (Buenos Aires, Argentina)

Nico Lubcker: Ph.D. Candidate, University of Pretoria (Pretoria, South Africa)

Dr. Karin Maldonado: Research Professor, University of Chile (Santiago, Chile)

Natasha Phillips: Ph.D. Candidate, Queens University (Belfast, Northern Ireland)

Dr. Francisca Santana: Postdoc, Universidad de Antofagasta (Antofagasta, Chile)

Juliann Schamel: Biologist, Channel Islands National Park (Ventura)

Clarissa Teixeira: Ph.D. Student, Universidade Federal de Santa Catarina (Santa Catarina, Brazil)

Matthew Tietbohl: Ph.D. Candidate, King Abdullah University of Science and Technology (Thuwal, Saudi Arabia)

Dr. Damian G. Vales: Research Professor, Centro Nacional Patagonico (Puerto Madryn, Argentina)

Katie Wedemeyer-Strombel: Ph.D. Candidate, University of Texas El Paso (El Paso)

Hannah Wellman: Ph.D. Candidate, University of Oregon (Eugene)

Dana Wright: Ph.D. Candidate, Duke University (Beaufort)

Dr. Nico deBruyn: Professor, Pretoria University (Pretoria)

Dr. Stanley Gehrt: Professor, Ohio State University (Columbus)

Dr. Marilyn L. Fogel: Professor and EDGE Director, UC Riverside (Riverside)

Dr. Chris Harrod: Professor, University of Antofagasta (Antofagasta, Chile)

Dr. Keith A. Hobson: Professor, Western Ontario University (London, Canada)

Dr. Tyler Kartzinel: Assistant Professor, Brown University (Providence)

Dr. Douglas Kelt: Professor, University of California Davis (Davis)

Dr. Kate Lyons: Assistant Professor, University of Nebraska (Lincoln)

Dr. Karin Maldonado: Professor, Universidade Adolfo Ibañez (Santiago, Chile)

Dr. Craig McClain: Executive Director, Louisiana Marine Consortium (Chauvin)

Dr. Gabriela Nardoto: Professor, Universidade de Brasilia (Brasilia, Brazil)

Dr. Luciana Riccialdelli: Professor, Centro Austral de Investigaciones Cientificas (Ushuaia, Argentina)

Dr. Andy Read: Professor, Duke University Marine Laboratory (Beaufort)

Dr. Pablo Sabat: Professor, Universidade de Chile (Santiago, Chile)

Dr. Irene Salinas: Associate Professor, University of New Mexico (Albuquerque)

Dr. Zachary Sharp: Distinguished Professor, University of New Mexico (Albuquerque)

Dr. Felisa Smith: Professor, University of New Mexico (Albuquerque)

Dr. Cristina Takacs-Vesbach: Professor, University of New Mexico (Albuquerque)

Dr. Justin Yeakel: Assistant Professor, University of California Merced (Merced)